HMGN2P17

Across TCGA patient cohorts, HMGN2P17 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,155 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGN2P17-associated GO terms across cancer lineages are DNA replication, synthesis of primer, Cell cycle DNA replication, and DNA-templated DNA replication. Each is linked with HMGN2P17 in more than 26 cancer types. Because this analysis shows association rather than direction, both HMGN2P17-to-partner and partner-to-HMGN2P17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA replication, synthesis of primer grouped by HMGN2P17-low versus HMGN2P17-high in THYM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P17→partner) and Y-score (partner→HMGN2P17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	DNA replication, synthesis of primer →	+0.098	+1.528	<.001	<.001	3	27
THYM	Cell cycle DNA replication →	+0.077	+0.829	<.001	<.001	3	27
STAD	DNA-templated DNA replication →	+0.074	+0.425	<.001	<.001	3	25
STAD	Mitotic nuclear division →	+0.067	+0.338	<.001	<.001	3	25
STAD	Microtubule cytoskeleton organization involved in mitosis →	+0.068	+0.362	<.001	<.001	3	25
STAD	U2-type prespliceosome assembly →	+0.063	+0.364	<.001	<.001	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,155 associations by consensus.

DNA replication, synthesis of primer by HMGN2P17 expression — THYM

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