HMGN1P9

Across TCGA patient cohorts, HMGN1P9 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,349 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible HMGN1P9-associated GO terms across cancer lineages are Regulation of chromatin organization, Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway, and RNA export from nucleus. Each is linked with HMGN1P9 in more than 13 cancer types. Because this analysis shows association rather than direction, both HMGN1P9-to-partner and partner-to-HMGN1P9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of chromatin organization grouped by HMGN1P9-low versus HMGN1P9-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN1P9→partner) and Y-score (partner→HMGN1P9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of chromatin organization →	+0.063	+0.071	<.001	<.001	3	14
UCS	Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway →	+0.070	+0.079	.001	.002	3	13
ESCA	RNA export from nucleus →	+0.068	+0.233	<.001	<.001	3	13
STAD	Macromolecule methylation →	+0.058	+0.070	<.001	<.001	3	13
STAD	Positive regulation of DNA repair →	+0.057	+0.077	<.001	<.001	3	13
STAD	Regulation of DNA repair →	+0.060	+0.081	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,349 associations by consensus.

Regulation of chromatin organization by HMGN1P9 expression — STAD

Explore this box plot interactively →