Across TCGA pan-cancer cohorts, HMGN1P10 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of HMGN1P10’s most consistent transcriptional readouts.
The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where HMGN1P10 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types HMGN1P10 is over-expressed in tumor, although a few such as THCA show the opposite, repressed pattern.
HNSC and THCA are the cancer types where HMGN1P10 tumor–normal differential expression is most reproducible.