Across TCGA patient cohorts, HMGB3P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,087 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible HMGB3P4-associated GO terms across cancer lineages are Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, Nucleobase-containing compound transport, and Nuclear-transcribed mRNA poly(A) tail shortening. Each is linked with HMGB3P4 in more than 32 cancer types. Because this analysis shows association rather than direction, both HMGB3P4-to-partner and partner-to-HMGB3P4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P4→partner) and Y-score (partner→HMGB3P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →	+0.065	+0.383	<.001	<.001	3	33
STAD	Nucleobase-containing compound transport →	+0.059	+0.454	<.001	<.001	3	32
LAML	Nuclear-transcribed mRNA poly(A) tail shortening →	+0.086	+0.760	<.001	<.001	3	32
DLBC	RISC complex assembly →	+0.070	+0.383	<.001	<.001	3	32
STAD	Nuclear-transcribed mRNA catabolic process →	+0.067	+0.399	<.001	<.001	3	32
STAD	Establishment of RNA localization →	+0.066	+0.459	<.001	<.001	3	32

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,087 associations by consensus.

Exploration

HMGB3P4 survival (RNA) · tumor vs normal (RNA) · all HMGB3P4 data types