HMGB3P30

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P30 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,682 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB3P30-associated GO terms across cancer lineages are Sister chromatid segregation, Signal transduction in response to DNA damage, and Regulation of cell cycle G2/M phase transition. Each is linked with HMGB3P30 in more than 11 cancer types. Because this analysis shows association rather than direction, both HMGB3P30-to-partner and partner-to-HMGB3P30 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P30→partner) and Y-score (partner→HMGB3P30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADSister chromatid segregation →+0.063+0.052<.001<.001312
STADSignal transduction in response to DNA damage →+0.049+0.044<.001<.001312
STADRegulation of cell cycle G2/M phase transition →+0.048+0.042<.001<.001311
STADPositive regulation of protein modification by small protein conjugation or removal →+0.052+0.066<.001<.001311
STADDNA replication →+0.055+0.052<.001<.001311
STADRecombinational repair →+0.049+0.047<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,682 associations by consensus.

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