HMGB3P22

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P22 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,223 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible HMGB3P22-associated proteins across cancer lineages are AKAP13_S2709, ERI3, and FAM120C. Each is linked with HMGB3P22 in more than 3 cancer types. Because this analysis shows association rather than direction, both HMGB3P22-to-partner and partner-to-HMGB3P22 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P22→partner) and Y-score (partner→HMGB3P22) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADAKAP13_S2709 →-0.538-0.401<.001<.00134
OVERI3 →+0.282+0.740.005.00434
BRCAFAM120C →+0.413+0.528<.001<.00134
OVWIPF1 →-0.359-0.742.006.00234
GBMZMYM3 →+0.268+0.477.001.00233
GBMRCSD1_S351 →-0.456-0.496.003.00633
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,223 associations by consensus.

Exploration