HMGB3P18

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P18 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,143 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible HMGB3P18-associated proteins across cancer lineages are PURA, NIP7, and STIM1. Each is linked with HMGB3P18 in more than 2 cancer types. Because this analysis shows association rather than direction, both HMGB3P18-to-partner and partner-to-HMGB3P18 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P18→partner) and Y-score (partner→HMGB3P18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPURA →+0.263+0.898.009.00433
UCECNIP7 →-0.316-0.819<.001.00233
CCRCCSTIM1 →-0.270-0.306.001.00233
UCECARHGAP6 →+0.444+0.770.002.00133
LSCCATP10D_S613 →-0.515-0.419<.001<.00132
LSCCCACNA2D1 →+0.460+0.345<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,143 associations by consensus.

Exploration