HMGB1P47

Across TCGA patient cohorts, HMGB1P47 RNA expression is significantly associated with the RNA expression of many other genes, with 5,288 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB1P47-associated genes across cancer lineages are RNU1-8P, PTMAP15, and ZNF970P. Each is linked with HMGB1P47 in more than 12 cancer types. Because this analysis shows association rather than direction, both HMGB1P47-to-partner and partner-to-HMGB1P47 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMGB1P47 versus RNU1-8P in KIRP, with a Pearson correlation of 0.61.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB1P47→partner) and Y-score (partner→HMGB1P47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	RNU1-8P →	+0.529	+0.251	<.001	<.001	3	13
UCS	PTMAP15 →	+1.131	+0.029	<.001	.003	3	12
UCS	ZNF970P →	+0.815	+0.027	.001	.006	3	12
KIRP	VENTXP7 →	+0.629	+0.123	<.001	<.001	3	12
KICH	TOPORSLP →	+1.679	+0.038	<.001	<.001	3	12
UCS	LINC02216 →	+0.901	+0.041	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,288 associations by consensus.

HMGB1P47 vs RNU1-8P — KIRP

Explore this scatter interactively →