HMGB1P47

Across TCGA patient cohorts, HMGB1P47 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,639 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB1P47-associated GO terms across cancer lineages are Axo-dendritic transport, Axonal transport, and Microtubule-based transport. Each is linked with HMGB1P47 in more than 10 cancer types. Because this analysis shows association rather than direction, both HMGB1P47-to-partner and partner-to-HMGB1P47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Axo-dendritic transport grouped by HMGB1P47-low versus HMGB1P47-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB1P47→partner) and Y-score (partner→HMGB1P47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Axo-dendritic transport →	+0.051	+0.227	<.001	<.001	3	11
STAD	Axonal transport →	+0.053	+0.221	<.001	<.001	3	10
ESCA	Microtubule-based transport →	+0.043	+0.190	<.001	<.001	3	10
STAD	Regulation of binding →	+0.054	+0.274	<.001	<.001	3	10
STAD	Anatomical structure maturation →	+0.031	+0.201	<.001	<.001	3	10
STAD	Regulation of microtubule polymerization or depolymerization →	+0.051	+0.310	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,639 associations by consensus.

Axo-dendritic transport by HMGB1P47 expression — STAD

Explore this box plot interactively →