HMGB1P13

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB1P13 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,286 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB1P13-associated GO terms across cancer lineages are Microtubule organizing center organization, Methylation, and Ribosomal small subunit biogenesis. Each is linked with HMGB1P13 in more than 9 cancer types. Because this analysis shows association rather than direction, both HMGB1P13-to-partner and partner-to-HMGB1P13 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB1P13→partner) and Y-score (partner→HMGB1P13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAMicrotubule organizing center organization →+0.042+0.089.001.003310
STADMethylation →+0.035+0.065<.001<.001310
STADRibosomal small subunit biogenesis →+0.050+0.053<.001<.001310
STADDNA-templated transcription initiation →+0.042+0.061<.001<.001310
ESCATranscription initiation at RNA polymerase II promoter →+0.047+0.113.001.001310
STADTranscription by RNA polymerase III →+0.040+0.050<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,286 associations by consensus.

Exploration