HMGB1P12

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB1P12 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,476 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HMGB1P12-associated GO terms across cancer lineages are Regulation of spindle organization, DNA replication, and Cell fate specification. Each is linked with HMGB1P12 in more than 7 cancer types. Because this analysis shows association rather than direction, both HMGB1P12-to-partner and partner-to-HMGB1P12 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB1P12→partner) and Y-score (partner→HMGB1P12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of spindle organization →+0.061+0.116<.001<.00138
STADDNA replication →+0.068+0.133<.001<.00128
LAMLCell fate specification →+0.036+0.094<.001<.00137
STADBlastocyst development →+0.056+0.116<.001<.00137
STADNegative regulation of DNA repair →+0.056+0.121<.001<.00128
ESCAPositive regulation of protein polyubiquitination →+0.061+0.128<.001.00837
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,476 associations by consensus.

Exploration