HMGA2-AS1

associated omics data
HMGA2 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored HMGA2-AS1 profile across patient tissues and cancer cell-line models. HMGA2-AS1 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, HMGA2-AS1 is differentially expressed in 15, with the highest sampling consensus in KIRC. Additionally, HMGA2-AS1 RNA expression shows 15,675 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight KIRC, and TGCT as cancer lineages where HMGA2-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes HMGA2-AS1 survival associations across molecular data types. HMGA2-AS1 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
HMGA2-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24KIRC (134)view →
This table ranks reproducible HMGA2-AS1 RNA expression–survival associations across cancer types. High HMGA2-AS1 expression shows unfavorable associations in KIRC, BLCA, STAD, LGG and ACC, but favorable associations in UCS. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for HMGA2-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianII,III,IV0.4350.607<.001134view →
UCSOSMedianII,III,IV0.7100.292<.00186view →
BLCADFSMedianAll0.4410.578.00163view →
STADOSMedianAll0.3310.675<.00160view →
LGGDFSMedianAll0.6280.814<.00153view →
ACCOSMedianIII,IV0.1840.753.00446view →
Pink = unfavorable, green = favorable. all 24 lineages →

HMGA2-AS1-KIRC (OS)

Kaplan–Meier survival curve for HMGA2-AS1 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes HMGA2-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15. The strongest signals are observed in KIRC for RNA.
HMGA2-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15KIRC (12)view →
This table ranks reproducible tumor–normal expression differences for HMGA2-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. HMGA2-AS1 shows lower tumor expression in KIRC and KIRP and higher tumor expression in HNSC, THCA, BLCA and LUAD. The KIRC box plot shows higher HMGA2-AS1 RNA expression in normal versus tumor tissue (log2 FC = −0.833, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleAll−0.833<.00112view →
HNSCAllIII,IV+0.271<.00112view →
THCAMaleAll+1.833<.0019view →
KIRPMaleAll−0.670<.0019view →
BLCAAllIII,IV+0.458.0019view →
LUADFemaleII,III,IV+0.596<.0018view →
Green = repressed in tumor. all 15 lineages →

HMGA2-AS1-KIRC

Tumor-vs-normal expression box plot for HMGA2-AS1 in KIRC.

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Cross-omics associations

This table shows molecular features associated with HMGA2-AS1 in patient tissues and cancer cell lines. In patient samples, HMGA2-AS1 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA15,675TGCT (5150)view →
Protein (mass-spec)12,966BRCA (4004)view →