HMG20B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HMG20B RNA expression is significantly associated with the go_rna of many other GO terms, with 4,866 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible HMG20B-associated GO terms across cancer lineages are Positive regulation of anaphase-promoting complex-dependent catabolic process, Pigment metabolic process involved in pigmentation, and Regulation of anaphase-promoting complex-dependent catabolic process. Each is linked with HMG20B in more than 18 cancer types. Because this analysis shows association rather than direction, both HMG20B-to-partner and partner-to-HMG20B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of anaphase-promoting complex-dependent catabolic process grouped by HMG20B-low versus HMG20B-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMG20B→partner) and Y-score (partner→HMG20B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEPositive regulation of anaphase-promoting complex-dependent catabolic process →+0.157+1.179<.001<.001319
LUNG_NSCLC_LUADPigment metabolic process involved in pigmentation →+0.296+0.747<.001<.001315
BONERegulation of anaphase-promoting complex-dependent catabolic process →+0.188+1.000.003.001315
LUNG_NSCLC_LUSCPhosphatidylinositol biosynthetic process →+0.061+1.264.002<.001313
BONECytoplasm protein quality control by the ubiquitin-proteasome system →+0.171+1.383<.001<.001313
URINARY_TRACTProtein depolymerization →+0.128+0.843.004.006313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,866 associations by consensus.

Positive regulation of anaphase-promoting complex-dependent catabolic process by HMG20B expression — BONE

Box plot of Positive regulation of anaphase-promoting complex-dependent catabolic process in HMG20B-low vs HMG20B-high samples in BONE.

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Exploration