HMG20A

Across TCGA cell cohorts, HMG20A RNA expression is significantly associated with the go_rna of many other GO terms, with 4,730 significant associations in total. BONE shows the largest number of these associations.

The most reproducible HMG20A-associated GO terms across cancer lineages are Heterochromatin organization, Regulation of nucleotide-excision repair, and Regulation of RNA stability. Each is linked with HMG20A in more than 15 cancer types. Because this analysis shows association rather than direction, both HMG20A-to-partner and partner-to-HMG20A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Heterochromatin organization grouped by HMG20A-low versus HMG20A-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMG20A→partner) and Y-score (partner→HMG20A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Heterochromatin organization →	+0.064	+0.614	<.001	<.001	3	16
BREAST	Regulation of nucleotide-excision repair →	+0.116	+0.941	.001	.001	3	16
BLOOD_Lymphoma	Regulation of RNA stability →	+0.063	+1.309	<.001	<.001	3	16
KIDNEY	Peptidyl-serine phosphorylation →	+0.113	+0.946	<.001	<.001	3	15
KIDNEY	Peptidyl-serine modification →	+0.110	+0.946	<.001	<.001	3	15
BONE	Nuclear export →	+0.102	+0.724	.001	.007	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,730 associations by consensus.

Heterochromatin organization by HMG20A expression — OVARY

Explore this box plot interactively →