HLA-G

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-G RNA is linked to patient survival in 25 of 34 cancer types, making it the most broadly survival-associated HLA-G data layer compared with 6 for mutation status and 1 for mass-spec protein.

The strongest signal is observed in uveal melanoma (UVM), where higher HLA-G RNA is associated with worse disease-free survival. In most high-consensus cancer types, elevated HLA-G expression acts as an unfavorable survival marker, although some lineages such as SKCM and BLCA show a favorable association.

UVM, SKCM, and BLCA are the cancer types where HLA-G RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSTertileAll0.4140.819<.00181view →
SKCMOSMedianII,III,IV0.5090.300<.00180view →
BLCAOSTertileIII,IV0.7420.596.00552view →
LGGDFSTertileAll0.6420.817<.00140view →
STADOSQuartileIII,IV0.4880.726.00238view →
SCLCDFSQuartileAll0.8680.533.00230view →
KIRCDFSTertileII,III,IV0.6170.384.00129view →
MESOOSMedianII,III,IV0.5170.292<.00128view →
ACCDFSQuartileIII,IV0.5650.180.00425view →
READDFSQuartileIV0.7500.267.00424view →
CHOLOSMedianAll0.9740.565.00820view →
KIRPOSMedianIV0.0450.523.02413view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 25 lineages.

Exploration