HLA-DOA

Mutation & survival
SurvivalMutationKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-DOA Mutation is linked to patient survival in 7 of 34 cancer types, making it a survival-associated HLA-DOA data layer compared with 20 for mass-spec protein and 2 for mass-spec protein.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where higher HLA-DOA Mutation is associated with worse overall survival. In most high-consensus cancer types, elevated HLA-DOA expression acts as an unfavorable survival marker.

BLCA, LUAD, and CHOL are the cancer types where HLA-DOA Mutation most reproducibly stratifies survival.

Mutation survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCAOSMedianIV0.1300.599.00221view →
LUADOSMedianAll0.1580.835<.00112view →
CHOLDFSMedianAll0.0370.486.0016view →
UCECOSMedianIV0.2310.592.0366view →
STADOSMedianAll0.2500.729.0286view →
LIHCDFSMedianII,III,IV0.0440.427<.0016view →
LGGOSMedianAll0.3170.799.0153view →
Pink = unfavorable, green = favorable. Showing the 7 strongest of 7 lineages.

Exploration