HIGD1A

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, HIGD1A mass-spec protein differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of HIGD1A’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where HIGD1A mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types HIGD1A is over-expressed in tumor, although a few such as CCRCC and COAD show the opposite, repressed pattern.

CCRCC, COAD, and HNSC are the cancer types where HIGD1A tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in HIGD1A mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCFemaleIII,IV−1.057<.00112view →
COADMaleIV−0.545<.00111view →
HNSCMaleIV−0.600<.0018view →
LUADAllII,III,IV+0.323<.0017view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 4 strongest of 4 lineages.

HIGD1A–CCRCC

Tumor-vs-normal mass-spec protein box plot for HIGD1A in CCRCC.

Open the CCRCC breakdown →

Exploration