HECA

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HECA mutation is significantly associated with the RNA expression of many other genes, with 4,350 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HECA-associated genes across cancer lineages are SIGLEC27P, FRG2MP, and MIR3661. Each is linked with HECA in more than 1 cancer types. Because this analysis shows association rather than direction, both HECA-to-partner and partner-to-HECA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SIGLEC27P grouped by HECA-low versus HECA-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HECA→partner) and Y-score (partner→HECA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADSIGLEC27P →+0.046+4.070.007.00932
SKCMFRG2MP →+0.033+4.147<.001.00832
UCECMIR3661 →+0.548+1.557<.001<.00132
UCECTRGJP1 →+0.360+1.696<.001.00332
SKCMRPL35P9 →+0.249+3.821<.001.00332
SKCMRNU6-1190P →+0.432+3.906<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,350 associations by consensus.

SIGLEC27P by HECA expression — COAD

Box plot of SIGLEC27P in HECA-low vs HECA-high samples in COAD.

Explore this box plot interactively →

Exploration