HCK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HCK protein abundance is significantly associated with the RNA expression of many other genes, with 20,267 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HCK-associated genes across cancer lineages are CYTH4, SIRPB1, and TLR8. Each is linked with HCK in more than 9 cancer types. Because this analysis shows association rather than direction, both HCK-to-partner and partner-to-HCK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HCK versus CYTH4 in GBM, with a Pearson correlation of 0.88.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HCK→partner) and Y-score (partner→HCK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCYTH4 →+1.231+0.876<.001<.001310
UCECSIRPB1 →+0.727+0.562<.001<.001310
GBMTLR8 →+1.282+0.871<.001<.001310
OVTNFSF13B →+0.943+0.540<.001<.001310
GBMIL21R →+1.263+0.802<.001<.001310
GBMLILRB1 →+1.135+0.908<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,267 associations by consensus.

HCK vs CYTH4 — GBM

Per-sample scatter of HCK vs CYTH4 in GBM (Pearson r = 0.88).

Explore this scatter interactively →

Exploration