HCFC1-AS1

Across TCGA patient cohorts, HCFC1-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 13,010 significant associations in total. THYM shows the largest number of these associations.

The most reproducible HCFC1-AS1-associated genes across cancer lineages are PTPRC, IKZF1, and PIM2. Each is linked with HCFC1-AS1 in more than 24 cancer types. Because this analysis shows association rather than direction, both HCFC1-AS1-to-partner and partner-to-HCFC1-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HCFC1-AS1 versus PTPRC in CHOL, with a Pearson correlation of 0.63.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HCFC1-AS1→partner) and Y-score (partner→HCFC1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CHOL	PTPRC →	+1.637	+0.445	.002	<.001	3	25
THYM	IKZF1 →	+1.825	+1.792	<.001	<.001	3	25
SKCM	PIM2 →	+1.133	+0.324	<.001	<.001	3	25
THYM	SLAMF1 →	+2.941	+2.206	<.001	<.001	3	25
CHOL	ITGAL →	+1.605	+0.459	<.001	<.001	3	24
THYM	TRAF3IP3 →	+1.686	+1.809	<.001	<.001	3	24

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,010 associations by consensus.

HCFC1-AS1 vs PTPRC — CHOL

Explore this scatter interactively →