HCFC1-AS1

Across TCGA patient cohorts, HCFC1-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,993 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible HCFC1-AS1-associated proteins across cancer lineages are USF1, ITGA3, and ITPKC. Each is linked with HCFC1-AS1 in more than 2 cancer types. Because this analysis shows association rather than direction, both HCFC1-AS1-to-partner and partner-to-HCFC1-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HCFC1-AS1 versus USF1 in GBM, with a Pearson correlation of 0.22.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HCFC1-AS1→partner) and Y-score (partner→HCFC1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	USF1 →	+0.261	+0.545	.009	.008	3	3
GBM	ITGA3 →	-0.620	-0.557	<.001	<.001	3	3
HNSC	ITPKC →	-0.545	-0.739	<.001	<.001	3	3
PDAC	EPS15 →	+0.195	+0.324	<.001	.001	3	3
GBM	LRRC47 →	+0.220	+0.476	<.001	.001	3	3
OV	SRRM2_S1419 →	-0.717	-0.412	.003	.007	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,993 associations by consensus.

HCFC1-AS1 vs USF1 — GBM

Explore this scatter interactively →