H3C9P

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H3C9P mutation is significantly associated with the RNA expression of many other genes, with 28 significant associations in total. BLCA shows the largest number of these associations.

The most reproducible H3C9P-associated genes across cancer lineages are LINC01221, MIR4466, and MIR4774. Each is linked with H3C9P in more than 1 cancer types. Because this analysis shows association rather than direction, both H3C9P-to-partner and partner-to-H3C9P results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H3C9P→partner) and Y-score (partner→H3C9P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCALINC01221 →+0.124+5.497<.001.00432
UCECMIR4466 →+0.992+7.245<.001<.00131
BLCAMIR4774 →+0.504+5.411<.001.00531
BLCAMIR4646 →+0.633+5.899<.001.00231
BLCAHMGB3P11 →+0.060+5.588.006.00431
BLCARPL7P30 →+0.069+5.106<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

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