H3-2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H3-2 protein abundance is significantly associated with the RNA expression of many other genes, with 6,110 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible H3-2-associated genes across cancer lineages are CYTH4, HCK, and AQP9. Each is linked with H3-2 in more than 2 cancer types. Because this analysis shows association rather than direction, both H3-2-to-partner and partner-to-H3-2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, H3-2 versus CYTH4 in HNSC, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H3-2→partner) and Y-score (partner→H3-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCYTH4 →+1.038+0.783<.001<.00133
HNSCHCK →+0.968+0.763.005<.00133
PDACAQP9 →+1.464+0.902<.001<.00133
PDACRCN3 →+0.620+0.753<.001.00133
LUADADM →+1.293+0.725.002.00533
COADVEGFC →+0.780+0.321<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,110 associations by consensus.

H3-2 vs CYTH4 — HNSC

Per-sample scatter of H3-2 vs CYTH4 in HNSC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration