H1-8

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, H1-8 mutation is significantly associated with the mutation status of many other genes, with 966 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible H1-8-associated genes across cancer lineages are VNN3, ECHDC1, and LZTS1. Each is linked with H1-8 in more than 1 cancer types. Because this analysis shows association rather than direction, both H1-8-to-partner and partner-to-H1-8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VNN3 grouped by H1-8-low versus H1-8-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H1-8→partner) and Y-score (partner→H1-8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEVNN3 →+3.744+4.044.003.00312
LARGE_INTESTINEECHDC1 →+3.744+4.044.003.00312
LARGE_INTESTINELZTS1 →+3.744+4.044.003.00312
LARGE_INTESTINENCKAP1 →+3.159+4.632<.001<.00112
LARGE_INTESTINEU2AF2 →+3.007+3.584.008.00812
LARGE_INTESTINEGLP2R →+3.007+3.584.008.00812
Each partner links to its Q-omics profile. Showing the 6 strongest of 966 associations by consensus.

VNN3 by H1-8 expression — LARGE_INTESTINE

Box plot of VNN3 in H1-8-low vs H1-8-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration