H1-4

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, H1-4 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of H1-4’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where H1-4 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types H1-4 is over-expressed in tumor, although a few such as LUAD and LSCC show the opposite, repressed pattern.

CCRCC, LUAD, and LSCC are the cancer types where H1-4 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in H1-4 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCMaleAll+0.723<.00111view →
LUADFemaleAll−1.220<.0018view →
LSCCMaleAll−1.338<.0017view →
PDACMaleAll−0.676.0243view →
OVAllAll+0.746.0472view →
HNSCMaleIII,IV−0.320.0132view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

H1-4–CCRCC

Tumor-vs-normal mass-spec protein box plot for H1-4 in CCRCC.

Open the CCRCC breakdown →

Exploration