H1-4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H1-4 protein abundance is significantly associated with the RNA expression of many other genes, with 13,315 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible H1-4-associated genes across cancer lineages are DCAF17, CSF3R, and FFAR2. Each is linked with H1-4 in more than 4 cancer types. Because this analysis shows association rather than direction, both H1-4-to-partner and partner-to-H1-4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, H1-4 versus DCAF17 in LSCC, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H1-4→partner) and Y-score (partner→H1-4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDCAF17 →-0.461-0.646<.001<.00135
GBMCSF3R →+1.367+1.230<.001<.00135
LSCCFFAR2 →+0.878+0.634<.001.00335
GBMCXCR2 →+1.035+1.027<.001<.00135
LSCCHSPA4 →-0.395-0.892<.001<.00135
LUADADGRG3 →+0.988+0.840<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,315 associations by consensus.

H1-4 vs DCAF17 — LSCC

Per-sample scatter of H1-4 vs DCAF17 in LSCC (Pearson r = -0.46).

Explore this scatter interactively →

Exploration