H1-10-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, H1-10-AS1 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of H1-10-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in liver hepatocellular carcinoma (LIHC), where H1-10-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types H1-10-AS1 is over-expressed in tumor, although a few such as LUAD and KICH show the opposite, repressed pattern.

LIHC, LUAD, and CHOL are the cancer types where H1-10-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in H1-10-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV+0.669<.0019view →
LUADAllII,III,IV−0.465<.0017view →
CHOLFemaleAll+2.623<.0015view →
KICHFemaleAll−0.806<.0015view →
THCAAllAll+0.471<.0014view →
BRCAFemaleAll−0.453<.0014view →
KIRCFemaleAll+0.200.0232view →
PRADAllAll+0.185.0272view →
HNSCAllAll+0.176.0252view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

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