GZMH

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GZMH mutation is significantly associated with the RNA expression of many other genes, with 497 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GZMH-associated genes across cancer lineages are RNU6-621P, RARRES2P4, and MTND2P25. Each is linked with GZMH in more than 1 cancer types. Because this analysis shows association rather than direction, both GZMH-to-partner and partner-to-GZMH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-621P grouped by GZMH-low versus GZMH-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GZMH→partner) and Y-score (partner→GZMH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU6-621P →+0.410+4.126<.001.00432
COADRARRES2P4 →+0.206+4.321<.001.00232
LUADMTND2P25 →+0.039+7.930.001.00832
LUSCRPS3AP1 →+0.216+5.417<.001<.00132
UCECCOX15 →+0.639+3.223<.001.00931
UCECSLC7A11 →+1.623+3.459<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 497 associations by consensus.

RNU6-621P by GZMH expression — COAD

Box plot of RNU6-621P in GZMH-low vs GZMH-high samples in COAD.

Explore this box plot interactively →

Exploration