GYPC

Across TCGA cell cohorts, GYPC RNA expression is significantly associated with the go_rna of many other GO terms, with 3,040 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible GYPC-associated GO terms across cancer lineages are Maintenance of protein localization in organelle, Maintenance of protein location, and Maintenance of protein location in cell. Each is linked with GYPC in more than 7 cancer types. Because this analysis shows association rather than direction, both GYPC-to-partner and partner-to-GYPC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Maintenance of protein localization in organelle grouped by GYPC-low versus GYPC-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GYPC→partner) and Y-score (partner→GYPC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Maintenance of protein localization in organelle →	+0.126	+3.262	.001	<.001	3	8
LIVER	Maintenance of protein location →	+0.133	+3.511	<.001	<.001	3	8
LIVER	Maintenance of protein location in cell →	+0.131	+3.275	<.001	<.001	3	8
SOFT_TISSUE	Maintenance of location in cell →	+0.069	+2.389	.003	.002	3	6
BREAST	Biological process involved in interaction with host →	+0.072	+1.204	.001	.004	3	6
BONE	Vascular associated smooth muscle cell development →	+0.265	+3.686	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,040 associations by consensus.

Maintenance of protein localization in organelle by GYPC expression — LIVER

Explore this box plot interactively →