GTPBP3

Across TCGA patient cohorts, GTPBP3 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,437 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GTPBP3-associated proteins across cancer lineages are BRD4, CHERP, and SUGP1. Each is linked with GTPBP3 in more than 7 cancer types. Because this analysis shows association rather than direction, both GTPBP3-to-partner and partner-to-GTPBP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GTPBP3 versus BRD4 in LSCC, with a Pearson correlation of 0.70.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GTPBP3→partner) and Y-score (partner→GTPBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	BRD4 →	+0.304	+0.800	<.001	<.001	3	8
LSCC	CHERP →	+0.277	+0.775	<.001	<.001	3	8
LSCC	SUGP1 →	+0.212	+0.747	<.001	<.001	3	7
GBM	SF3B3 →	+0.270	+0.479	<.001	<.001	3	7
BRCA	ATAD2 →	+0.601	+0.521	<.001	<.001	3	7
OV	NELFE →	+0.548	+0.563	.006	.002	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,437 associations by consensus.

GTPBP3 vs BRD4 — LSCC

Explore this scatter interactively →