GTF3C1

Across TCGA cell cohorts, GTF3C1 RNA expression is significantly associated with the RNA expression of many other genes, with 11,413 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GTF3C1-associated genes across cancer lineages are TAOK2, UBFD1, and RNF40. Each is linked with GTF3C1 in more than 19 cancer types. Because this analysis shows association rather than direction, both GTF3C1-to-partner and partner-to-GTF3C1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GTF3C1 versus TAOK2 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.72.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GTF3C1→partner) and Y-score (partner→GTF3C1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	TAOK2 →	+1.225	+1.208	<.001	<.001	3	20
UPPER_AERODIGESTIVE_TRACT	UBFD1 →	+1.075	+0.892	<.001	<.001	3	19
LIVER	RNF40 →	+1.218	+0.688	.002	<.001	2	20
BREAST	PPP4C →	+1.108	+1.405	<.001	<.001	3	19
LIVER	XPO6 →	+0.983	+0.638	<.001	.001	3	19
BLOOD_Myeloma	SPNS1 →	+1.112	+0.782	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,413 associations by consensus.

GTF3C1 vs TAOK2 — LUNG_NSCLC_LUSC

Explore this scatter interactively →