GRIK5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRIK5 mutation is significantly associated with the RNA expression of many other genes, with 4,848 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GRIK5-associated genes across cancer lineages are SNX24, RN7SL248P, and COL9A1. Each is linked with GRIK5 in more than 3 cancer types. Because this analysis shows association rather than direction, both GRIK5-to-partner and partner-to-GRIK5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNX24 grouped by GRIK5-low versus GRIK5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRIK5→partner) and Y-score (partner→GRIK5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNX24 →+0.335+2.137.002<.00134
UCECRN7SL248P →+0.039+2.513<.001.00433
COADCOL9A1 →-0.801-2.893.001.00133
COADF10 →-0.923-2.906.008.00133
LUADMIR6775 →+0.579+2.696.001.00233
UCECJOSD1 →+0.372+1.830<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,848 associations by consensus.

SNX24 by GRIK5 expression — UCEC

Box plot of SNX24 in GRIK5-low vs GRIK5-high samples in UCEC.

Explore this box plot interactively →

Exploration