GRIFIN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRIFIN RNA expression is significantly associated with the go_rna of many other GO terms, with 7,113 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GRIFIN-associated GO terms across cancer lineages are TOR signaling, Obsolete histone methylation, and Peptidyl-lysine modification. Each is linked with GRIFIN in more than 27 cancer types. Because this analysis shows association rather than direction, both GRIFIN-to-partner and partner-to-GRIFIN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TOR signaling grouped by GRIFIN-low versus GRIFIN-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GRIFIN→partner) and Y-score (partner→GRIFIN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADTOR signaling →+0.069+0.367<.001<.001327
STADObsolete histone methylation →+0.081+0.363<.001<.001327
STADPeptidyl-lysine modification →+0.064+0.386<.001<.001327
STADNuclear-transcribed mRNA catabolic process, nonsense-mediated decay →+0.077+0.357<.001<.001327
STADPositive regulation of stem cell population maintenance →+0.065+0.314<.001<.001327
STADProtein polyubiquitination →+0.071+0.380<.001<.001327
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,113 associations by consensus.

TOR signaling by GRIFIN expression — STAD

Box plot of TOR signaling in GRIFIN-low vs GRIFIN-high samples in STAD.

Explore this box plot interactively →

Exploration