GRHL1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRHL1 mutation is significantly associated with the total protein of many other genes, with 41 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GRHL1-associated genes across cancer lineages are MSH6, TFRC, and Caspase-7-cleavedD198. Each is linked with GRHL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GRHL1-to-partner and partner-to-GRHL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSH6 grouped by GRHL1-low versus GRHL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRHL1→partner) and Y-score (partner→GRHL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMSH6 →-0.376-1.807<.001.02432
SKCMTFRC →+0.783+3.321.004.00932
UCECCaspase-7-cleavedD198 →+0.830+2.756<.001<.00132
UCECCaspase-8 →-0.260-4.295.001<.00132
UCEC4E-BP1 →+0.259+3.700.003.00132
UCECDvl3 →+0.126+1.502.037.02732
Each partner links to its Q-omics profile. Showing the 6 strongest of 41 associations by consensus.

MSH6 by GRHL1 expression — UCEC

Box plot of MSH6 in GRHL1-low vs GRHL1-high samples in UCEC.

Explore this box plot interactively →

Exploration