GRAMD1B

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GRAMD1B RNA expression is significantly associated with the go_rna of many other GO terms, with 3,986 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible GRAMD1B-associated GO terms across cancer lineages are Nucleic acid transport, RNA transport, and Nuclear transport. Each is linked with GRAMD1B in more than 6 cancer types. Because this analysis shows association rather than direction, both GRAMD1B-to-partner and partner-to-GRAMD1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleic acid transport grouped by GRAMD1B-low versus GRAMD1B-high in URINARY_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GRAMD1B→partner) and Y-score (partner→GRAMD1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTNucleic acid transport →+0.082+1.251<.001.00737
URINARY_TRACTRNA transport →+0.082+1.251<.001.00737
SOFT_TISSUENuclear transport →+0.066+1.791<.001.00137
SOFT_TISSUENucleocytoplasmic transport →+0.066+1.791<.001.00137
KIDNEYLysosome to ER cholesterol transport →-0.173-1.894<.001<.00136
OESOPHAGUSCranial nerve development →-0.098-1.829<.001.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,986 associations by consensus.

Nucleic acid transport by GRAMD1B expression — URINARY_TRACT

Box plot of Nucleic acid transport in GRAMD1B-low vs GRAMD1B-high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration