GPX3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPX3 mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GPX3-associated genes across cancer lineages are Myosin-IIa, p62 Lck ligand, and VHL. Each is linked with GPX3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GPX3-to-partner and partner-to-GPX3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPX3→partner) and Y-score (partner→GPX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMyosin-IIa →+0.182+2.818.041.03531
UCECp62 Lck ligand →+0.341+3.009.024.01931
UCECVHL →-0.783-2.321.013.03431
UCECCaspase-7-cleavedD198 →+0.783+2.584.004.01131
UCECMEK1 →+0.441+2.321.009.03421
UCECCaspase-8 →-0.263-3.169.024.01921
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Exploration