GPR146

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GPR146 mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GPR146-associated genes across cancer lineages are VN1R4, PNLIPRP2, and TARM1. Each is linked with GPR146 in more than 1 cancer types. Because this analysis shows association rather than direction, both GPR146-to-partner and partner-to-GPR146 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VN1R4 grouped by GPR146-low versus GPR146-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPR146→partner) and Y-score (partner→GPR146) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSVN1R4 →+0.098+5.754<.001.00231
CNSPNLIPRP2 →+0.102+4.981<.001.00831
BLOOD_LymphomaTARM1 →+0.021+4.643<.001.00531
BLOOD_LeukemiaC20orf85 →+0.049+5.969<.001.00131
BLOOD_LeukemiaIL22 →+0.050+6.569<.001<.00131
BLOOD_LeukemiaKRTAP4-6 →+0.048+5.201<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

VN1R4 by GPR146 expression — CNS

Box plot of VN1R4 in GPR146-low vs GPR146-high samples in CNS.

Explore this box plot interactively →

Exploration