GPN3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPN3 mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GPN3-associated genes across cancer lineages are eEF2, A-Raf_pS299, and ERK2. Each is linked with GPN3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GPN3-to-partner and partner-to-GPN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by GPN3-low versus GPN3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPN3→partner) and Y-score (partner→GPN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.327+2.999.031.03531
UCECA-Raf_pS299 →-0.143-3.169.004.01831
UCECERK2 →+0.208+2.222.011.01131
UCECFoxM1 →+0.247+2.222.024.01131
UCECFOXO3a →+0.096+2.820.025.03531
UCECGab2 →+0.314+1.700.038.04431
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

eEF2 by GPN3 expression — UCEC

Box plot of eEF2 in GPN3-low vs GPN3-high samples in UCEC.

Explore this box plot interactively →

Exploration