GPM6BP3

Across TCGA patient cohorts, GPM6BP3 RNA expression is significantly associated with the RNA expression of many other genes, with 4,304 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible GPM6BP3-associated genes across cancer lineages are AGGF1P7, MIR519D, and FABP5P13. Each is linked with GPM6BP3 in more than 10 cancer types. Because this analysis shows association rather than direction, both GPM6BP3-to-partner and partner-to-GPM6BP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPM6BP3 versus AGGF1P7 in ESCA, with a Pearson correlation of 0.84.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPM6BP3→partner) and Y-score (partner→GPM6BP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	AGGF1P7 →	+0.558	+0.236	<.001	<.001	3	11
KIRP	MIR519D →	+0.951	+0.086	<.001	<.001	3	11
KIRP	FABP5P13 →	+0.707	+0.080	<.001	<.001	3	10
KIRP	VENTXP7 →	+1.700	+0.034	<.001	.001	3	10
KIRP	PHKG1P3 →	+0.791	+0.079	<.001	<.001	3	10
ESCA	LINC02619 →	+0.667	+0.179	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,304 associations by consensus.

GPM6BP3 vs AGGF1P7 — ESCA

Explore this scatter interactively →