GPM6BP3

Across TCGA patient cohorts, GPM6BP3 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,770 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GPM6BP3-associated GO terms across cancer lineages are Skeletal system morphogenesis, Cell-cell junction assembly, and Dendrite development. Each is linked with GPM6BP3 in more than 5 cancer types. Because this analysis shows association rather than direction, both GPM6BP3-to-partner and partner-to-GPM6BP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Skeletal system morphogenesis grouped by GPM6BP3-low versus GPM6BP3-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GPM6BP3→partner) and Y-score (partner→GPM6BP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Skeletal system morphogenesis →	+0.146	+0.142	<.001	.001	3	6
STAD	Cell-cell junction assembly →	+0.120	+0.132	<.001	<.001	3	6
ESCA	Dendrite development →	+0.122	+0.121	<.001	<.001	3	5
ESCA	Nucleoside phosphate biosynthetic process →	+0.151	+0.067	<.001	.003	3	5
ESCA	Regulation of cell junction assembly →	+0.131	+0.122	<.001	.002	3	5
ESCA	Pallium development →	+0.134	+0.123	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,770 associations by consensus.

Skeletal system morphogenesis by GPM6BP3 expression — ESCA

Explore this box plot interactively →