GPC6-AS1

Across TCGA patient cohorts, GPC6-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,905 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible GPC6-AS1-associated proteins across cancer lineages are GPC6, P3H1, and PDZRN3_S848. Each is linked with GPC6-AS1 in more than 7 cancer types. Because this analysis shows association rather than direction, both GPC6-AS1-to-partner and partner-to-GPC6-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPC6-AS1 versus GPC6 in LSCC, with a Pearson correlation of 0.71.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GPC6-AS1→partner) and Y-score (partner→GPC6-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	GPC6 →	+0.846	+1.008	<.001	<.001	3	8
LSCC	P3H1 →	+0.463	+0.651	<.001	<.001	3	5
LSCC	PDZRN3_S848 →	+0.826	+0.795	<.001	<.001	3	5
BRCA	PLOD2 →	+0.845	+0.071	<.001	.002	3	5
LUAD	CPXM1 →	+0.432	+0.837	<.001	<.001	3	5
LSCC	CRTAP →	+0.455	+0.582	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,905 associations by consensus.

GPC6-AS1 vs GPC6 — LSCC

Explore this scatter interactively →