GPATCH8

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GPATCH8 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,981 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GPATCH8-associated GO terms across cancer lineages are Epigenetic regulation of gene expression, Nucleocytoplasmic transport, and Negative regulation of myoblast fusion. Each is linked with GPATCH8 in more than 19 cancer types. Because this analysis shows association rather than direction, both GPATCH8-to-partner and partner-to-GPATCH8 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GPATCH8→partner) and Y-score (partner→GPATCH8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEEpigenetic regulation of gene expression →+0.077+0.778.001.003320
SOFT_TISSUENucleocytoplasmic transport →+0.080+1.087<.001<.001318
LUNG_NSCLC_LUADNegative regulation of myoblast fusion →+0.088+0.588<.001<.001318
UPPER_AERODIGESTIVE_TRACTNegative regulation of syncytium formation by plasma membrane fusion →+0.141+0.929<.001.001318
BONENegative regulation of gene expression, epigenetic →+0.084+0.875<.001<.001318
SOFT_TISSUERegulation of mRNA splicing, via spliceosome →+0.104+1.046<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,981 associations by consensus.

Exploration