GPATCH4

Across TCGA patient cohorts, GPATCH4 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,358 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPATCH4-associated proteins across cancer lineages are RPRD2, RRP15, and SUPT16H. Each is linked with GPATCH4 in more than 7 cancer types. Because this analysis shows association rather than direction, both GPATCH4-to-partner and partner-to-GPATCH4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPATCH4 versus RPRD2 in LSCC, with a Pearson correlation of 0.65.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GPATCH4→partner) and Y-score (partner→GPATCH4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RPRD2 →	+0.308	+0.655	<.001	<.001	3	8
GBM	RRP15 →	+0.409	+0.343	<.001	.001	3	8
GBM	SUPT16H →	+0.468	+0.374	.001	<.001	3	7
OV	TRMT1L →	+0.374	+0.340	.002	.006	3	7
LSCC	ADAR →	+0.331	+0.607	<.001	<.001	3	7
LSCC	C1orf35 →	+0.369	+0.527	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,358 associations by consensus.

GPATCH4 vs RPRD2 — LSCC

Explore this scatter interactively →