GOLGA6C

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GOLGA6C mutation is significantly associated with the total protein of many other genes, with 22 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GOLGA6C-associated genes across cancer lineages are JNK_pT183_Y185, mTOR_pS2448, and Notch1. Each is linked with GOLGA6C in more than 1 cancer types. Because this analysis shows association rather than direction, both GOLGA6C-to-partner and partner-to-GOLGA6C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, JNK_pT183_Y185 grouped by GOLGA6C-low versus GOLGA6C-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GOLGA6C→partner) and Y-score (partner→GOLGA6C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJNK_pT183_Y185 →-0.279-3.000.004.03631
UCECmTOR_pS2448 →-0.189-3.000.028.03731
UCECNotch1 →+0.221+3.000.006.03731
UCECp38-MAPK_pT180_Y182 →-0.608-2.986.019.03731
UCECAnnexin-1 →+0.827+3.000.006.03731
UCECCyclin-E2 →+0.209+2.817.031.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

JNK_pT183_Y185 by GOLGA6C expression — UCEC

Box plot of JNK_pT183_Y185 in GOLGA6C-low vs GOLGA6C-high samples in UCEC.

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Exploration