GNRHR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNRHR protein abundance is significantly associated with the RNA expression of many other genes, with 2,180 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible GNRHR-associated genes across cancer lineages are KLHDC3, FAM171A1, and RPS2P28. Each is linked with GNRHR in more than 1 cancer types. Because this analysis shows association rather than direction, both GNRHR-to-partner and partner-to-GNRHR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNRHR versus KLHDC3 in LSCC, with a Pearson correlation of -0.91.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNRHR→partner) and Y-score (partner→GNRHR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCKLHDC3 →-0.996-0.629<.001.00132
LSCCFAM171A1 →-1.650-0.629.008.00132
LSCCRPS2P28 →-0.633-0.523.008.00132
GBMFOXO6-AS1 →-1.257-0.648.006<.00132
GBMTOB1-AS1 →-0.520-0.661.001.00232
GBMPXN-AS1 →-0.475-0.646.006.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,180 associations by consensus.

GNRHR vs KLHDC3 — LSCC

Per-sample scatter of GNRHR vs KLHDC3 in LSCC (Pearson r = -0.91).

Explore this scatter interactively →

Exploration