GNPNAT1

Across TCGA patient cohorts, GNPNAT1 protein abundance is significantly associated with the RNA expression of many other genes, with 12,618 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible GNPNAT1-associated genes across cancer lineages are RTRAF, ERO1A, and CNIH1. Each is linked with GNPNAT1 in more than 8 cancer types. Because this analysis shows association rather than direction, both GNPNAT1-to-partner and partner-to-GNPNAT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNPNAT1 versus RTRAF in COAD, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNPNAT1→partner) and Y-score (partner→GNPNAT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RTRAF →	+0.453	+0.370	<.001	<.001	3	9
LSCC	ERO1A →	+1.034	+0.471	<.001	<.001	3	8
BRCA	CNIH1 →	+0.538	+0.487	.001	.001	3	7
BRCA	STYX →	+0.709	+0.637	<.001	<.001	3	7
LSCC	PSMC6 →	+0.602	+0.482	<.001	<.001	3	7
COAD	PRMT5 →	+0.624	+0.462	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,618 associations by consensus.

GNPNAT1 vs RTRAF — COAD

Explore this scatter interactively →