GNMT

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNMT mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GNMT-associated genes across cancer lineages are Erythrocytes. Each is linked with GNMT in more than 1 cancer types. Because this analysis shows association rather than direction, both GNMT-to-partner and partner-to-GNMT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Erythrocytes grouped by GNMT-low versus GNMT-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNMT→partner) and Y-score (partner→GNMT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECErythrocytes →+0.041+3.000.004.03711
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

Erythrocytes by GNMT expression — UCEC

Box plot of Erythrocytes in GNMT-low vs GNMT-high samples in UCEC.

Explore this box plot interactively →

Exploration