GNGT2

Across TCGA patient cohorts, GNGT2 RNA expression is significantly associated with the RNA expression of many other genes, with 15,692 significant associations in total. UVM shows the largest number of these associations.

The most reproducible GNGT2-associated genes across cancer lineages are CD300A, LST1, and C19orf38. Each is linked with GNGT2 in more than 33 cancer types. Because this analysis shows association rather than direction, both GNGT2-to-partner and partner-to-GNGT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNGT2 versus CD300A in SARC, with a Pearson correlation of 0.71.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNGT2→partner) and Y-score (partner→GNGT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SARC	CD300A →	+1.844	+1.208	<.001	<.001	3	34
BLCA	LST1 →	+1.989	+1.247	<.001	<.001	3	34
LAML	C19orf38 →	+1.397	+0.907	<.001	<.001	3	34
BLCA	CYTH4 →	+1.908	+1.246	<.001	<.001	3	34
SCLC	ABI3 →	+2.283	+1.458	<.001	<.001	3	34
SKCM	SNX20 →	+2.123	+1.512	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,692 associations by consensus.

GNGT2 vs CD300A — SARC

Explore this scatter interactively →