GNGT2

Across TCGA patient cohorts, GNGT2 protein abundance is significantly associated with the RNA expression of many other genes, with 9,598 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GNGT2-associated genes across cancer lineages are IL2RB, CD79A, and IRF4. Each is linked with GNGT2 in more than 2 cancer types. Because this analysis shows association rather than direction, both GNGT2-to-partner and partner-to-GNGT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNGT2 versus IL2RB in CCRCC, with a Pearson correlation of 0.80.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNGT2→partner) and Y-score (partner→GNGT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	IL2RB →	+1.254	+0.275	.003	.001	3	3
LSCC	CD79A →	+1.367	+0.338	<.001	.003	3	3
CCRCC	IRF4 →	+1.641	+0.275	<.001	.001	3	3
LUAD	CETN2 →	-0.735	-0.383	<.001	.004	3	3
LSCC	MALSU1 →	-0.428	-0.419	<.001	<.001	3	3
GBM	FPR3 →	+1.165	+0.733	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,598 associations by consensus.

GNGT2 vs IL2RB — CCRCC

Explore this scatter interactively →