GNGT1

Across TCGA cell cohorts, GNGT1 RNA expression is significantly associated with the RNA expression of many other genes, with 4,555 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible GNGT1-associated genes across cancer lineages are CALCR, FAM183A, and SLC5A12. Each is linked with GNGT1 in more than 4 cancer types. Because this analysis shows association rather than direction, both GNGT1-to-partner and partner-to-GNGT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNGT1 versus CALCR in SOFT_TISSUE, with a Pearson correlation of 0.50.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNGT1→partner) and Y-score (partner→GNGT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	CALCR →	+0.336	+0.416	.001	<.001	3	5
STOMACH	FAM183A →	+0.976	+0.767	<.001	.001	2	5
LUNG_NSCLC_LUAD	SLC5A12 →	+0.382	+0.516	.003	<.001	3	4
CNS	CNGB3 →	+0.353	+1.650	<.001	<.001	3	4
BLOOD_Myeloma	POU6F2 →	+1.610	+0.455	<.001	.001	3	4
LUNG_NSCLC_LUSC	ALG1L →	+2.665	+0.968	<.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,555 associations by consensus.

GNGT1 vs CALCR — SOFT_TISSUE

Explore this scatter interactively →